Education

Links that might be helpful

Dataverse: A dataverse is a container for all your datasets, files, and metadata. Harvard Dataverse is a repository to deposit data and code.  

Laboratory Notebooks: eLabNext is a browser-based platform designed to streamline research data management in laboratories. The platform offers some integrated tools and features that may help researchers, scientists, and lab managers efficiently document, store, organize, and share data throughout the research process.

Countway Library: The mission of the Countway Library is to cultivate and advance education, research, scholarship and professional growth in the health and biomedical sciences by facilitating access to scholarly information and knowledge, preserving a historical record, and creating a stimulating and synergistic setting for intellectual growth

 


 

 

Education Materials

Manuals

VS120 Whole Slide Scanning User Manual Slidescanner Manual (13.68 MB) , Slidescanner Manual PDF (3.18 MB)
SP8 STED User Manual Leica SP8X STED.pptx (7.26 MB) , STED-3X-Theory-STED Gated.pdf (13.18 MB)
SP8X Confocal User Manual Leica SP8X Confocal.pptx (7.26 MB)
LaVision UltraMicroscope Training Manual Lightsheet Manual v2 (4.44 MB)
Zeiss LCM Manual Zeiss LCM information (650.52 KB)
LaVision: Cleaning the Cuvette A clean cuvette can impact your image quality (1.18 MB)
Quick Guide to Stellaris Stellaris Quick Guide (277.69 KB)
Tiling Steps for Leica Confocals Setting up Tiling Steps in Leica Confocal Microscopes (92.52 KB)
Hyugen's Deconvolution Software Manual Hyugen's User Guide (16.98 MB)

Protocols

STED Sample Preparation 2019 New sample prep protocol October 2019 (5.49 MB)
ACD Bio Probes list ACD_RNAscope_Probe_List_Nov2017.xlsx (3.38 MB)
Laser Capture RNA Sample Preparation Zeiss-RNA-handling.pdf (13.93 MB)
Laser Capture DNA Sample Preparation ZEISS-DNA-handling.pdf (7.26 MB)
Zeiss Guide to Disinfecting Microscopes Microscope Disinfection Protocol (4.63 MB)
Why Mounting Media is Important This is an informative paper on the importance of choosing the right mounting media (541.77 KB)
Zeiss Laser Capture Consumables List Use system serial number CS042008 for discount consumables (307.5 KB)
MINFLUX GLOX Buffer Protocol (22.95 KB) , Guide to Sample Prep (1.7 MB) , Quick lookup for MEA concentrations (16.63 KB)
STED READ THIS BEFORE YOU START A STED PROJECT (16.16 KB) , Sample Prep (6.1 MB) , Mowoil mounting media Protocol (optional) (704.9 KB) , TDE can also be used as a mounting media (463.92 KB)
Preparing for MINFLUX Imaging This is a brief document to help you prepare for MINFLUX imaging (23.78 KB)
NIF Data Management Plan Data Management Plan (241.55 KB)

Tutorials

Fiji for Beginners Fiji for Beginners.pdf (1.8 MB) , Utriclewhole1.oib (44.01 MB) , Image1.oib (3.08 MB)
Fundamentals in Optics and Microscopy Seminar Series about optics and microscopy (2.98 MB)
Microscopy Showdown Seminar Series about optics and microscopy (3.14 MB)
Seeing is believing? A beginners’ guide to practical pitfalls in image acquisition A beginners’ guide to image acquisition (2.24 MB)
Optics in Microscopy Fundamentals of Optics in Microscopy (2.37 MB) , Scanning Microscopes (8.96 MB) , Widefield Microscopes (2.51 MB)
Huygens Workshop
Zeiss Arivis AI eBook Zeiss Arivis AI eBook (3.62 MB)